Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865683:139865713:[+] chr3:185348417:185348454:[+] nonBSJ supported 3UTR

circRNA 5':AAAAUCUGUGUCUUCCACCAAAU--------CCAAGUCU 3'


            |||||::|| |||| |||||||


target  3':GUUUAGGUACUU-AGGUCAAACUUCUGAUUCGGUUCAGU 5'

 -19.40 1 RIC-seq
chrX:139865687:139865713:[+] chr3:185348417:185348451:[+] nonBSJ supported 3UTR

circRNA 5': UCUGUGUCUUCCACCAAAU--------CCAAGUCU 3'


            ||::|| |||| |||||||


target  3':UAGGUACUU-AGGUCAAACUUCUGAUUCGGUUCAGU 5'

 -16.00 1 RIC-seq