5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865709:139865771:[+] | chr2:27898454:27898528:[+] | nonBSJ supported | CDS |
circRNA 5':AGUCUU-CCAGUAAAUCUA-GUUCUUC-CAGAAAAA---UCUAGAUCUU-CCAGUCA-AUCA------GUGUCUUCC 3' ||||| ||||: ||| :|||| |||| ||| :||| |||||| |||| ||||| || target 3': UAGAACGGUCGGA-AGAAGUAAGACAAGUCUGCGAAGAAGAGUUAGUCCGGUCAGGAUAGUUCUUUACACAGUAGU 5' |
-41.90 | 1 | RIC-seq |
| chrX:139865723:139865771:[+] | chr2:27898473:27898523:[+] | nonBSJ supported | CDS |
circRNA 5':UCUAGU--UCUUCCAGAAAAAUCUAGAU-CUUCCAGUCAAUCAGUGUCU-UCC 3' |:||: ||||| || |||: |||| |||||||| |:| ||| target 3':CGGUCGGAAGAAGUAAGACA-AG-UCUGCGAAGAAGAGUUAGUC-CGGUCAGGA 5' |
-32.20 | 1 | RIC-seq |
| chrX:139865770:139865836:[+] | chr2:27888050:27888106:[+] | nonBSJ supported | CDS |
circRNA 5':CCAGAAAGAAAUCCAGGUCUUCCAG-UCAAUCAGUGUCUUCCAGAAAGAAAUCC-AG-GUCUUCCAGUCA 3' |||| ||||| ||:|| || ||| | |||||| ||| || :||||| || target 3':AGUCUCCA--UAGGUAAAGGAGAAGAAG-UAGACUCAGAAG----------AGGAUCGUAGAAGAAGAGG 5' |
-35.00 | 1 | RIC-seq |
| chrX:139866370:139866431:[+] | chr2:27887974:27888022:[+] | nonBSJ supported | CDS |
circRNA 5':GUCUUCCAACAAAGCCA-UGUCUUCCAUCAAAUUAAUGUC--UUCCAGCCUACUUGUGUCUUCCA 3' ||:| |||| ||| |||: ||| |||| ||:| ||||||| target 3': AGGAAGUUGACACAAUGACA------------AUUGAGCCUAAGA-CGGA-GAGC-CAGAAGGA 5' |
-26.90 | 2 | RIC-seq |