Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865662:139865682:[+] chr3:63602474:63602491:[+] nonBSJ supported 3UTR

circRNA 5':AGCUAAUCCAUGUCUUCCAGA 3'


            ||||| ||| ||||||:


target  3':ACGAUUU--UAC-GAAGGUUG 5'

 -15.90 14 RIC-seq
chrX:139865662:139865695:[+] chr3:63602463:63602491:[+] nonBSJ supported 3UTR

circRNA 5':AGCUAAUCCAUGUCUUCCAGAAAAAUCUGUGUCU 3'


            ||||| ||| ||||||: ||: :||


target  3':ACGAUUU--UAC-GAAGGUUGUAGU-GAU-UAGU 5'

 -17.90 16 RIC-seq