Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865862:139865881:[+] chr2:180835438:180835456:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCACCAAAUCCAGGU 3'


            |||||||||||||| ||:


target  3':AAGAAGGUGGUUUAGUUCU 5'

 -24.80 1 RIC-seq
chrX:139865862:139865881:[+] chr2:180835439:180835456:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCACCAAAUCCAGGU 3'


            |||||||||||||| ||:


target  3': AGAAGGUGGUUUAGUUCU 5'

 -24.20 1 RIC-seq