Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866701:139866750:[+] chr4:20714707:20714750:[+] nonBSJ supported Intron

circRNA 5':AGCAUCUUC-----AUGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGCUCA 3'


            |||||:|| |||||||| ||| |||||:|


target  3':AUGUAGGAGAUUUCUACAGAAGU-----------UCAUACAUCAAUAGACCGGGA 5'

 -28.10 1 RIC-seq
chrX:139866704:139866750:[+] chr4:20714707:20714748:[+] nonBSJ supported Intron

circRNA 5': AUCUUC-----AUGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGCUCA 3'


            |||:|| |||||||| ||| |||||:|


target  3':GUAGGAGAUUUCUACAGAAGU-----------UCAUACAUCAAUAGACCGGGA 5'

 -23.20 1 RIC-seq