Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866235:139866264:[+] chr1:247462094:247462129:[-] nonBSJ supported 3UTR

circRNA 5': CAAGU---CCACGUCUUCCA---ACAAAGCCAUGUC 3'


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target  3':GGUUGUAUUGGU-CAGAAGGUCCUUGUUAUGGUACAA 5'

 -28.90 1 RIC-seq
chrX:139866370:139866390:[+] chr1:247462105:247462129:[-] nonBSJ supported 3UTR

circRNA 5': GUCUUCCA---ACAAAGCCAUGUC 3'


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target  3':UCAGAAGGUCCUUGUUAUGGUACAA 5'

 -25.10 1 RIC-seq