Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866303:139866321:[+]	chr1:65243537:65243554:[+]	nonBSJ supported	CDS	circRNA 5':CCCUCAAAUCCAUAGCUUC 3' \|\| \|\|\|\|\|\|\|\|\|\|\|\|:\| target 3': GGUGUUUAGGUAUCGGAA 5'	-23.20	1	RIC-seq
chrX:139866303:139866321:[+]	chr1:65243537:65243555:[+]	nonBSJ supported	CDS	circRNA 5':CCCUCAAAUCCAUAGCUUC 3' \|\| \|\|\|\|\|\|\|\|\|\|\|\|:\| target 3':AGGUGUUUAGGUAUCGGAA 5'	-24.40	8	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866303:139866321:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC