Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865470:139865498:[+] chr1:65427803:65427821:[-] nonBSJ supported Intron

circRNA 5':CCAUGUCUUCCGGACAAUCCAUGUCUUCC 3'


            ||||:|:|| || ||||||


target  3':UGUACGGGAGUCC---------CAGAAG 5'

 -20.10 1 RIC-seq
chrX:139865470:139865507:[+] chr1:65427803:65427830:[-] nonBSJ supported Intron

circRNA 5':CCAUGUCUUCCGGACAAUCCAUGUCUUCCAAGAAGCUC 3'


            ||||:|:|| || |||||||| :||


target  3':UGUACGGGAGUCC---------CAGAAGGUGAUCUGA 5'

 -26.00 1 RIC-seq