Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865934:139865979:[+] chr17:7478043:7478094:[+] nonBSJ supported Intron

circRNA 5':AUGUCUUC--CUGA----AGAUCCACGUCUU---CCAGAAAAUCCAUGUCU-UCCA 3'


            ||||:: |||| |||| |:|| ||||| |||: ||| :||


target  3':AACAGGGACCGACUAUACUCUACCCGUAGUGGUUGGUCUAC--GGUG-AGAUGGG 5'

 -28.00 2 RIC-seq
chrX:139866052:139866070:[+] chr17:7480138:7480155:[+] nonBSJ supported Intron

circRNA 5':GGAUAAUU-UGGGUCUUCCU 3'


            ||:| ||||: |||


target  3':ACUGUGCGUACCCG--AGGU 5'

 -13.70 1 RIC-seq