Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865354:139865383:[+] chr6:33747424:33747449:[-] nonBSJ supported Intron

circRNA 5':CCUGUGUCAAGGUCUUCCAACAACUCCGGG 3'


            |||: | |||| |||:|


target  3':UGACGGA---CCAGUCUUAUUUU-AGGUCA 5'

 -15.40 2 RIC-seq
chrX:139865354:139865408:[+] chr6:33747424:33747483:[-] nonBSJ supported Intron

circRNA 5':CCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA---GCGACUUC------AAGUCUU-CCA 3'


            |||: | |||| |||:| |||| |||| ||| |||| ||


target  3':UGACGGA---CCAGUCUUAUUUU-AGGUCAUAAAGGAAUACGCUAAAGGUAUCAUUCAUUUUGG 5'

 -27.00 2 RIC-seq