Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866730:139866763:[+] chr17:42809115:42809157:[+] nonBSJ supported Intron

circRNA 5':AGUCUUCCA--UCAACUGGCUCAAUAU-------CCAUGUCUU 3'


            ||||||| || ||||||||| |||: ||::


target  3': UAGAAGGGGGAGGUGACCGAGUCAGGUCGUCGUGGUGGAGGGG 5'

 -32.50 10 RIC-seq
chrX:139866730:139866763:[+] chr17:42809117:42809157:[+] nonBSJ supported Intron

circRNA 5':AGUCUUCCA--UCAACUGGCUCAAUAU-------CCAUGUCUU 3'


            ||||||| || ||||||||| |||: ||:


target  3': UAGAAGGGGGAGGUGACCGAGUCAGGUCGUCGUGGUGGAGG 5'

 -31.70 1 RIC-seq
chrX:139866730:139866764:[+] chr17:42809114:42809157:[+] nonBSJ supported Intron

circRNA 5':AGUCUUCCA--UCAACUGGCUCAAUAU-------CCAUGUCUUC 3'


            ||||||| || ||||||||| |||: ||::|


target  3': UAGAAGGGGGAGGUGACCGAGUCAGGUCGUCGUGGUGGAGGGGG 5'

 -34.10 10 RIC-seq
chrX:139866730:139866765:[+] chr17:42809113:42809157:[+] nonBSJ supported Intron

circRNA 5':AGUCUUCCA--UCAACUGGCUCAAUAU-------CCAUGUCUUCC 3'


            ||||||| || ||||||||| |||: ||::||


target  3': UAGAAGGGGGAGGUGACCGAGUCAGGUCGUCGUGGUGGAGGGGGU 5'

 -37.40 1 RIC-seq
chrX:139866730:139866766:[+] chr17:42809112:42809157:[+] nonBSJ supported Intron

circRNA 5':AGUCUUCCA--UCAACUGGCUCAAUAU-------CCAUGUCUUCCA 3'


            ||||||| || ||||||||| |||: ||::|||


target  3': UAGAAGGGGGAGGUGACCGAGUCAGGUCGUCGUGGUGGAGGGGGUA 5'

 -39.30 2 RIC-seq
chrX:139866731:139866763:[+] chr17:42809115:42809154:[+] nonBSJ supported Intron

circRNA 5':GUCUUCCAUCAACUGGCUCAAUAU-------CCAUGUCUU 3'


            ||::|| || ||||||||| |||: ||::


target  3':AAGGGGG-AGGUGACCGAGUCAGGUCGUCGUGGUGGAGGGG 5'

 -31.60 1 RIC-seq