Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865783:139865808:[+] chr3:183888981:183889008:[+] nonBSJ supported 3UTR

circRNA 5':CAGGUCUUCCAGUCAAU-CA-GUGUCUU 3'


            |:||| || || |||:||


target  3':UUUCAGUUCUCCAAACGUGUGCACGGAC 5'

 -11.40 1 RIC-seq
chrX:139865784:139865808:[+] chr3:183888981:183889006:[+] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCAGUCAAU-CA-GUGUCUU 3'


            |||| || || |||:||


target  3': UCAGUUCUCCAAACGUGUGCACGGAC 5'

 -10.50 1 RIC-seq