Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865878:139865899:[+] chr1:156181389:156181412:[+] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCAGUCAA--UCCACAU 3'


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target  3':ACAAGAAGGUCGUAAGGAGGUGUC 5'

 -22.50 19 RIC-seq
chrX:139866686:139866719:[+] chr1:156181391:156181419:[+] nonBSJ supported 3UTR

circRNA 5':AUCUCUGUG-UCUUCCAGCAUCUUCAUGUCUUCCA 3'


            ||| |:|| ||||||||||| ||:||||


target  3':GAGAAAUACAAGAAGGUCGUA-------AGGAGGUG 5'

 -30.60 6 RIC-seq