Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866051:139866064:[+] chr9:136629069:136629081:[-] nonBSJ supported 3UTR

circRNA 5':CGGAUAAUUUGGGU 3'


            ||| :||||


target  3':ACCUUCU-GACCCU 5'

 -10.20 16 RIC-seq
chrX:139866051:139866064:[+] chr9:136629070:136629081:[-] nonBSJ supported 3UTR

circRNA 5':CGGAUAAUUUGGGU 3'


            ||| :||||


target  3': CCUUCU-GACCCU 5'

 -9.00 25 RIC-seq
chrX:139866105:139866109:[+] chr9:136629072:136629076:[-] nonBSJ supported 3UTR

circRNA 5':CAGAA 3'


            |||


target  3':UUCUG 5'

 -0.80 1 RIC-seq
chrX:139866332:139866345:[+] chr9:136629069:136629082:[-] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCAGGAA 3'


            || | |||


target  3':ACCUUCUGACCCUC 5'

 -4.70 1 RIC-seq