Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866696:139866720:[+] chr21:45564796:45564817:[+] nonBSJ supported CDS

circRNA 5':CUUCCAGCAUCUUCAUGUCUUCCAA 3'


            ||||||||:|||| || |||


target  3':CAAGGUCGUGGAAGG--AGU-GGUA 5'

 -24.30 43 RIC-seq
chrX:139866697:139866720:[+] chr21:45564796:45564817:[+] nonBSJ supported CDS

circRNA 5': UUCCAGCAUCUUCAUGUCUUCCAA 3'


            ||||||||:|||| || |||


target  3':CAAGGUCGUGGAAGG--AGU-GGUA 5'

 -24.10 1 RIC-seq
chrX:139866698:139866720:[+] chr21:45564796:45564816:[+] nonBSJ supported CDS

circRNA 5': UCCAGCAUCUUCAUGUCUUCCAA 3'


            |||||||:|||| || |||


target  3':AAGGUCGUGGAAGG--AGU-GGUA 5'

 -23.50 1 RIC-seq