Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865376:139865389:[+] chr19:47423243:47423256:[+] nonBSJ supported CDS

circRNA 5':ACUCCGGGUCUUCC 3'


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target  3':AGAGGUCCAAAAGA 5'

 -16.20 1 RIC-seq
chrX:139865376:139865396:[+] chr19:47423237:47423256:[+] nonBSJ supported CDS

circRNA 5':ACUCCGGGUCUUCCAGCGACU 3'


            ||||:||| ||| :||


target  3':AGAGGUCCAAAAGAAAUUUG 5'

 -16.90 21 RIC-seq
chrX:139866220:139866232:[+] chr19:47425562:47425576:[+] nonBSJ supported CDS

circRNA 5':AUCCGU--GUCUUCC 3'


            ||||: ||||||


target  3':GAGGCGCCCAGAAGC 5'

 -14.60 2 RIC-seq