Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865877:139865907:[+] chr1:151373827:151373854:[+] nonBSJ supported Intron

circRNA 5':CAGGUCUUCCAGUCAAUCCACAUCUUCCGGA 3'


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target  3':AUCCA-AGGGUCGUGUAGG-G-AGUGGGCCA 5'

 -28.90 17 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139865877:139865907:[+] circRNA - chrX:139865903-139865904 C>T LINC-JP ICGC