Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866093:139866142:[+] chr5:130665331:130665393:[+] nonBSJ supported Intron

circRNA 5':AGCCAUGUCUUCCAGAAAA---------UCCACAUCUUCCAA---UGGCCU-CC-AGGUCUUCC 3'


            ||||||| |||| ||| |:||: : |||: || |||:||:|


target  3':GUGGUACACCCGGUCCAACCAGAACUUGAGGACUGGAGUCCCCUAGGCGGGUGGAUCCGGAGG 5'

 -37.00 1 RIC-seq
chrX:139866093:139866143:[+] chr5:130665346:130665393:[+] nonBSJ supported Intron

circRNA 5':AGCCAUGUCUUCCAGAAAAUCCACAUCUUCCAAUGGCCUCCAGGUCUUCCA 3'


            ||||||| |||| :||| ||:||| |||| |||


target  3':GUGGUACACCCGGUCCAACCAGAACUUGAGG--ACUGGA-GUCCCCUAGGC 5'

 -35.50 1 RIC-seq