Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866587:139866609:[+] chr7:44620582:44620600:[-] nonBSJ supported Intron

circRNA 5':UCUUCCAACAAAUCCAUGUCUUC 3'


            |||| || ||||| |||:


target  3':UGAAGA--GUA-AGGUA-AGAGA 5'

 -10.10 11 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866587:139866609:[+] circRNA - chrX:139866592-139866593 C>A LICA-CN ICGC