Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865822:139865862:[+] chr7:94919982:94920005:[+] nonBSJ supported 3UTR

circRNA 5':CAGGUCUUCCAGUCAGUCAGUGUCUUCCAGAAAAAUCUACG 3'


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target  3': UCCU-AGGGU--GUGA------------CUUUUAAG-UGC 5'

 -9.50 1 RIC-seq
chrX:139865689:139865701:[+] chr7:94898761:94898773:[+] nonBSJ supported CDS

circRNA 5':UGUGUCUUCCACC 3'


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target  3':UCUAAGAAGGUGU 5'

 -12.70 2 RIC-seq
chrX:139866413:139866428:[+] chr7:94855394:94855408:[+] nonBSJ supported CDS

circRNA 5':AGCCUACUUGUGUCUU 3'


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target  3': CGAACGAACACAGGU 5'

 -13.60 1 RIC-seq