5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866670:139866748:[+] | chr7:137270003:137270059:[-] | nonBSJ supported | CDS |
circRNA 5':CUCCACGUC----UUCCAGC-AUCU--CUGUGUCUUCCAGCAUCUUCAUGUCUUCCAACAACUA-CCCAGUCUUCCAUCAACUGGCU 3' |||||:| ||||||| |||| |||| |||||| |||| |||||||: ||:| target 3':AAGGUGUACCUCCAAGGUCGCUAGAUCGACA--------------------------UGUUGACAGGGU-AGAAGGUGA---ACUGU 5' |
-46.90 | 21 | RIC-seq |
| chrX:139866676:139866747:[+] | chr7:137269999:137270059:[-] | nonBSJ supported | CDS |
circRNA 5':GUC-UUCCAGCAUCUCUGUGUCUUCCAGC-AUCUUCAUGUCUUCCAACAACUA-CCCAGUCUUCCAUCAACUGGC 3' || ||||| ||| | || |||||| |||| ||| |||||| |||| |||||||: ||:| target 3':AAGAAAGGU-GUACCU-C-CA--AGGUCGCUAGAUCGACA------UGUUGACAGGGU-AGAAGGUGA---ACUGU 5' |
-44.60 | 1 | RIC-seq |
| chrX:139866676:139866748:[+] | chr7:137269999:137270059:[-] | nonBSJ supported | CDS |
circRNA 5':GUC-UUCCAGCAUCUCUGUGUCUUCCAGC-AUCUUCAUGUCUUCCAACAACUA-CCCAGUCUUCCAUCAACUGGCU 3' || ||||| ||| | || |||||| |||| ||| |||||| |||| |||||||: ||:| target 3':AAGAAAGGU-GUACCU-C-CA--AGGUCGCUAGAUCGACA------UGUUGACAGGGU-AGAAGGUGA---ACUGU 5' |
-45.80 | 20 | RIC-seq |
| chrX:139866677:139866748:[+] | chr7:137269999:137270059:[-] | nonBSJ supported | CDS |
circRNA 5': UC-UUCCAGCAUCUCUGUGUCUUCCAGC-AUCUUCAUGUCUUCCAACAACUA-CCCAGUCUUCCAUCAACUGGCU 3' || ||||| ||| | || |||||| |||| ||| |||||| |||| |||||||: ||:| target 3':AAGAAAGGU-GUACCU-C-CA--AGGUCGCUAGAUCGACA------UGUUGACAGGGU-AGAAGGUGA---ACUGU 5' |
-45.80 | 1 | RIC-seq |
| chrX:139866704:139866747:[+] | chr7:137270003:137270059:[-] | nonBSJ supported | CDS |
circRNA 5':AUCUUCAUGUC--UUCCA-------------ACAACUA-CCCAGUCUUCCAUCAACUGGC 3' ||: |||| ||||| |||||| |||| |||||||: ||:| target 3':AAGGUGUACCUCCAAGGUCGCUAGAUCGACAUGUUGACAGGGU-AGAAGGUGA---ACUGU 5' |
-31.90 | 1 | RIC-seq |