Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865934:139865964:[+] chr15:59494562:59494585:[-] nonBSJ supported CDS

circRNA 5':AUGUCUUCCUGAAGAUCCACGUCUUCCAGAA 3'


            |||| |||| |||| |||| ||


target  3':AACAGUCGGACGUCUAA------AAGGCCU 5'

 -16.60 8 RIC-seq
chrX:139865934:139865966:[+] chr15:59494562:59494588:[-] nonBSJ supported CDS

circRNA 5':AUGUCUUCCUGAAGAUCCACGUCUUCCAGAAAA 3'


            |||| |||| |||| |||| ||||


target  3':AACAGUCGGACGUCUAA------AAGGCCUUUA 5'

 -18.40 9 RIC-seq