5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866599:139866658:[+] | chr16:18819025:18819065:[-] | nonBSJ supported | 3UTR |
circRNA 5':UCCAUGUCUUCCUAUAUCUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCG 3' |||: ||||| ||||| |:: ||||| |: || |:||| target 3':UGGUGAC--AGGAU-UAGAGAUUUUAC-----------GUCCC-----UUUUACAUGAGU 5' |
-21.40 | 1 | RIC-seq |
| chrX:139866599:139866660:[+] | chr16:18819025:18819092:[-] | nonBSJ supported | 3UTR |
circRNA 5':UCCAUGUCUUCCUAUAUCUC-------CAGGUCUUCCAGCAUCUC---CAGGGCUUCCAGC-AUCUGCUCGUC 3' |||: ||||| ||||| |||| ||| ||: ||||: ||:| target 3':UGGUGAC--AGGAU-UAGAGAUUUUACGUCCCUUUUACAU--GAGUUUGUUAAAAAAAAAAAUAGAUCAGUAA 5' |
-22.80 | 1 | RIC-seq |
| chrX:139865496:139865528:[+] | chr16:18840782:18840810:[-] | nonBSJ supported | CDS |
circRNA 5': UCCAAGAAGCUCCAAGUCUUCCAGUAA--AUCAAG 3' |||| ||| |||| ||| ||||| target 3':AAGGUGG--CGAA----AGAAUGUCUCUAGUAGUU 5' |
-14.20 | 2 | RIC-seq |
| chrX:139866222:139866251:[+] | chr16:18883507:18883533:[-] | nonBSJ supported | CDS |
circRNA 5':CCGUGUCUUCCAGCAAGUCCACGUCUUCCA 3' ||||||:| ||| :|||| | target 3':AGCACAGGACCAA-UUCCAA--UAGAAAGA 5' |
-12.90 | 1 | RIC-seq |