Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865762:139865787:[+] chr16:30767717:30767732:[+] nonBSJ supported CDS

circRNA 5':AGUGUCUUCCAGAAAGAAAUCCAGGU 3'


            |:| |||| |||||


target  3':CCGCUC--GGUC--------GGUCCU 5'

 -12.50 2 RIC-seq
chrX:139865784:139865798:[+] chr16:30767719:30767733:[+] nonBSJ supported CDS

circRNA 5':AGGUCUUCCAGUCAA 3'


            ||: ||||:||


target  3':ACCGCUCGGUCGGUC 5'

 -14.60 2 RIC-seq
chrX:139865823:139865838:[+] chr16:30767718:30767733:[+] nonBSJ supported CDS

circRNA 5':AGGUCUUCCAGUCAGU 3'


            ||: ||||:|||


target  3':ACCGCUCGGUCGGUCC 5'

 -17.20 25 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr16:30767717:30767732:[+] target 3721908 chr16:30767717-30767718 TC>T Glycogen_storage_disease_IXc ClinVar
chr16:30767717:30767732:[+] target 13631 chr16:30767717-30767718 T>G Glycogen_storage_disease_IXc ClinVar