5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866286:139866298:[+] | chr8:99054995:99055006:[-] | nonBSJ supported | 5UTR |
circRNA 5': CAGAAAAUCCUUG 3' |||| ||||| target 3':AGUCUAA-AGGAA 5' |
-8.50 | 16 | RIC-seq |
| chrX:139865345:139865398:[+] | chr8:99057276:99057314:[-] | nonBSJ supported | CDS |
circRNA 5':CCGA--UGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUC--UUCCAGCGACUUC 3' ||| ||| |||: |:|| :||||||||||| target 3':UGCUCAACCUCGGAUCUCAA-------------------CUAGCUGAGGUCGCUGAAA 5' |
-28.20 | 2 | RIC-seq |
| chrX:139865350:139865398:[+] | chr8:99057240:99057314:[-] | nonBSJ supported | CDS |
circRNA 5':GGC----ACCUGUGUCAAGGUCUUCCAACAACUCC----------GGGUCU-------------UCCAGCGACUUC 3' || |||: | ||||| || || |:|:|| ||||||||||| target 3':ACGAACAUGGGGUCCUG-CAUGAAGGGUGAAAAGUAUUGCUCAACCUCGGAUCUCAACUAGCUGAGGUCGCUGAAA 5' |
-34.30 | 14 | RIC-seq |
| chrX:139865385:139865405:[+] | chr8:99057301:99057318:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCAGCGACUUCAAGUCUU 3' |||||||||||| ||| target 3':UGAGGUCGCUGAAAA--AGA 5' |
-20.40 | 3 | RIC-seq |