Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866521:139866553:[+] chr10:105106992:105107024:[-] nonBSJ supported CDS

circRNA 5':AACCAAGCCAU-GU-CUUCCAGAAAAUCCACG-UCU 3'


            |||| || |||| ||| || |||


target  3':AUGGUCCAAAUCCAUGAAGAUCU----GGAGAAAGAA 5'

 -10.30 1 RIC-seq
chrX:139866521:139866553:[+] chr10:105106993:105107024:[-] nonBSJ supported CDS

circRNA 5':AACCAAGCCAU-GU-CUUCCAGAAAAUCCACG-UCU 3'


            |||| || |||| ||| || |||


target  3': UGGUCCAAAUCCAUGAAGAUCU----GGAGAAAGAA 5'

 -9.60 39 RIC-seq
chrX:139866531:139866553:[+] chr10:105107003:105107024:[-] nonBSJ supported CDS

circRNA 5':UGU-CUUCCAGAAAAUCCACG-UCU 3'


            || |||| ||| || |||


target  3':CCAUGAAGAUCU----GGAGAAAGAA 5'

 -7.10 1 RIC-seq