Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866614:139866645:[+] chr10:74647310:74647335:[+] nonBSJ supported 3UTR

circRNA 5':AUCUCCAGGUCUUCCAGCAUCUCCAGGGCUUC 3'


            |||||| |||:||| |||| ||||


target  3':AAGAGGUACAGGAGG-----GAGGGAACGAA 5'

 -29.70 2 RIC-seq
chrX:139866507:139866539:[+] chr10:74628906:74628931:[+] nonBSJ supported Intron

circRNA 5':AAUCCACGUCUUCCAACCAAGCCAUGUCUUCCA 3'


            |||||| ||| |||| ||||


target  3':AUAGGUGAUAUGAGUUC--UCGGA----AAGG 5'

 -17.10 1 RIC-seq
chrX:139866507:139866555:[+] chr10:74628882:74628931:[+] nonBSJ supported Intron

circRNA 5':AAUCCACGUCUUCCAACCAAGCCAUGUCUUC--CAGAAAAUCCAC--GUCUUC 3'


            |||||| ||| |||| ||:| ||| :||||


target  3':AUAGGUGAUAUGAGUUC--UCGGAA-AGGACUAGUCGUCAAUAAGACUAGAAU 5'

 -19.30 1 RIC-seq