5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866683:139866749:[+] | chr3:141011408:141011456:[+] | nonBSJ supported | CDS |
circRNA 5':AGCAUCUCUGUGUCUUCCAGCAUCUUCAUGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGCUC 3' |||||: :| :|||| |||||:| :|| |||||| :|| |||||| target 3':CUGUAGGUGC-UAGAACCG-GUAGAGGGGCAUC---------------CAGAAGA-GGUCGACCGAC 5' |
-36.40 | 13 | RIC-seq |
| chrX:139866691:139866749:[+] | chr3:141011408:141011462:[+] | nonBSJ supported | CDS |
circRNA 5':UGUGUCU---UCCAGCAUCUUCA-UGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGCUC 3' ||| |||| ||||| ::|||:|| |||||| :|| |||||| target 3':CCACCCCUGUAGGUGCUAGAACCGGUAGAGGGGCAUC-------CAGAAGA-GGUCGACCGAC 5' |
-36.00 | 15 | RIC-seq |
| chrX:139866698:139866749:[+] | chr3:141011408:141011453:[+] | nonBSJ supported | CDS |
circRNA 5': UCCAGCAUCUUCA-UGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGCUC 3' |||| ||||| ::|||:|| |||||| :|| |||||| target 3':UAGGUGCUAGAACCGGUAGAGGGGCAUC-------CAGAAGA-GGUCGACCGAC 5' |
-35.30 | 1 | RIC-seq |
| chrX:139866730:139866749:[+] | chr3:141011408:141011426:[+] | nonBSJ supported | CDS |
circRNA 5':AGUCUUCCAUCAACUGGCUC 3' |||||| :|| |||||| target 3':CCAGAAGA-GGUCGACCGAC 5' |
-19.40 | 1 | RIC-seq |