Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866002:139866052:[+] chr8:103839803:103839872:[-] nonBSJ supported 3UTR

circRNA 5':CCUCC-CAGUCUUCCAGAAAAUCCACGUCUUCCCAACAAUCCAAG-----------------------UCUUCCG 3'


            ||| |||| ||| :|:|||| :||||| ||||||


target  3':CGAGACGUCAAAAGACGUUAAAAUAAAGGGAGGG-----GGGUUCAAAUAAGUUUCAUAAAUUGUCUUAGAAGGU 5'

 -28.10 2 RIC-seq
chrX:139865762:139865807:[+] chr8:103850990:103851022:[-] nonBSJ supported CDS

circRNA 5':AGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAA--UCAGUGUCU 3'


            |||: ||||| |||| ||| ||||


target  3':GCACGUUAAA---------------AGAAGUUAAGUUAAAGUAACAGU 5'

 -15.00 2 RIC-seq
chrX:139865825:139865846:[+] chr8:103850999:103851022:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCAGUCAG--UCAGUGUCU 3'


            ||||| |||: ||| ||||


target  3':AAGAAGUUAAGUUAAAGUAACAGU 5'

 -13.90 2 RIC-seq