Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865350:139865403:[+]	chr3:134753605:134753651:[+]	nonBSJ supported	Intron	circRNA 5':GGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUC 3' \|\|\|\| \|: \|\|\| \|\|\| \|\|\| \|\| \|\|\| \|::\|\|\| \| \|\|\| \|\|: target 3':ACGUGA--AU-GUU-CAGUCGA-UGUC-AGACCCCGGGGGUGGACGAAC-UCGU 5'	-28.30	2	RIC-seq
chrX:139866331:139866359:[+]	chr3:134580577:134580616:[+]	nonBSJ supported	Intron	circRNA 5':CAGGUCUUCCAGGAA----------AUCC--GUGUCUUCCA 3' \|:\|:\|:\| \|\| \|\|\|\| :\|\|: :\|\|\| target 3':AUUCGGGACGUACGUAAUCAAUGAAUAGGACUACGAGAGG 5'	-15.60	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr3:134753605:134753651:[+]	target	-	chr3:134753644-134753645	T>C	PACA-CA	ICGC