Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866619:139866651:[+] chr11:124616554:124616571:[+] nonBSJ supported 3UTR

circRNA 5':CAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAU 3'


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target  3':CUCCA---------------CCCGCUCUUCGUU 5'

 -12.60 29 RIC-seq
chrX:139866683:139866705:[+] chr11:124616554:124616579:[+] nonBSJ supported 3UTR

circRNA 5':AGCAUCUCU--GUGUCUUCC-AGCAU 3'


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target  3':ACGCCCUUCUCCACCCGCUCUUCGUU 5'

 -4.80 1 RIC-seq