Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866570:139866589:[+] chr16:87636536:87636556:[+] nonBSJ supported 5UTR

circRNA 5':CUUCCAACUA-AGCUACGUCU 3'


            |||| |||| ||:|


target  3':UAAGGAAAAGCUCGACGCGGC 5'

 -13.10 2 RIC-seq
chrX:139866606:139866643:[+] chr16:87636530:87636556:[+] nonBSJ supported 5UTR

circRNA 5':CUUCCUAUAUCUCCAGGUCUUCCAGCAUCUCCA-GG-GCU 3'


            ||||| ||| ||| | || || ||


target  3':UAAGGAA------------AAGCUCGACGCGGCGCCUCG 5'

 -13.70 2 RIC-seq
chrX:139866606:139866644:[+] chr16:87636529:87636556:[+] nonBSJ supported 5UTR

circRNA 5':CUUCCUAUAUCUCCAGGUCUUCCAGCAUCUCCA-GG-GCUU 3'


            ||||| ||| ||| | || || ||:


target  3':UAAGGAA------------AAGCUCGACGCGGCGCCUCGG 5'

 -14.20 26 RIC-seq