Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866143:139866162:[+] chr7:82011141:82011159:[-] nonBSJ supported Intron

circRNA 5':AGACUAUCCAU-GUCUUCCAG 3'


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target  3':AUUG-UAGGUACCAGAU-GUA 5'

 -13.40 1 RIC-seq
chrX:139866257:139866288:[+] chr7:82011147:82011210:[-] nonBSJ supported Intron

circRNA 5':GCCAU-GUCUUC-----------CAGACUAUCCAUGUCU--------------------UCCAG 3'


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target  3': GGUACCAGAUGUAUAAACGUAAGUUUGUUGGGGCCGGAGAAUAAACGUAAACGGAAAAAGGUCA 5'

 -21.70 1 RIC-seq