Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866326:139866344:[+] chr2:230723504:230723522:[-] nonBSJ supported CDS

circRNA 5':AAAUCCAGGUCUUCCAGGA 3'


            |||||||: ||||||


target  3':AUUAGGUCUUCCAGGUCCA 5'

 -21.30 2 RIC-seq
chrX:139866486:139866505:[+] chr2:230638776:230638798:[-] nonBSJ supported Exon

circRNA 5': ACAAA-GGUACGUCUUCCAGA 3'


            |||| ||: :|::|||:|


target  3':GUGUUGACCGGAUGGGGGGUUUC 5'

 -14.00 1 RIC-seq
chrX:139866494:139866528:[+] chr2:230638769:230638798:[-] nonBSJ supported Exon

circRNA 5':ACGUCUUC-CAGAAAAUCCACGUCUUCCAACCAAGC 3'


            ||||||| ||: |:|| || ||||:


target  3':GGCAGAAGUGUUGAC------CGGAUGGGGGGUUUC 5'

 -23.40 3 RIC-seq