Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865494:139865521:[+] chr9:8691673:8691704:[-] nonBSJ supported Intron

circRNA 5':CUUCCAAGAAGCUC--CAAGUCU--UC-CAGUA 3'


            |||||||| ||: ||| :| ||||


target  3':UAAGGUUCUCCGGUUUGUUAAAAAUGGAGUCA 5'

 -18.70 2 RIC-seq
chrX:139866666:139866694:[+] chr9:8609526:8609567:[-] nonBSJ supported Intron

circRNA 5':ACAUCUCCACGUCUUCCAGC------------------AUCUCUGUG 3'


            ||| |||||| ||| |||||||:


target  3':CGUA-AGGUGCCU----UCGAACACAAUGGUACACUUCUAGAGACGA 5'

 -18.50 2 RIC-seq