Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865396:139865423:[+] chr2:166025258:166025285:[-] nonBSJ supported CDS

circRNA 5':UUCAAGUCUUCCAAUAAUCUCAAGGUCU 3'


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target  3':CAGGUCAGUCCUCCCAACGAGUUCCAGU 5'

 -20.00 1 RIC-seq
chrX:139865571:139865593:[+] chr2:166021001:166021024:[-] nonBSJ supported CDS

circRNA 5':CCAAAUCC--AGAUCUUCCAG-GAAA 3'


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target  3':AGUUUCCAUAUCUA--AGGUCACUUA 5'

 -11.20 11 RIC-seq