Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866029:139866070:[+] chr2:112874526:112874558:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCCAACAAUCCAAGUCUUCCGGAUAAUUUGGGUCUUCCU 3'


            |||| ||| |||| ||:| ||| |||||||:||


target  3':AAAGG--UGU----UUCAAGUGGUC-AUU--ACCCAGAGGGU 5'

 -28.80 3 RIC-seq
chrX:139866040:139866070:[+] chr2:112874526:112874557:[+] nonBSJ supported 3UTR

circRNA 5': UCCA---AGUCUUCCGGAUAAUUUGGGUCUUCCU 3'


            |||| ||| ||:| ||| |||||||:||


target  3':AAGGUGUUUCAAGUGGUC-AUU--ACCCAGAGGGU 5'

 -28.30 3 RIC-seq