Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866272:139866287:[+] chr2:109400260:109400275:[+] nonBSJ supported CDS

circRNA 5':CUAUCCAUGUCUUCCA 3'


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target  3':CAUAGGUACGGUAGGA 5'

 -19.90 12 RIC-seq
chrX:139866672:139866717:[+] chr2:109382199:109382242:[+] nonBSJ supported CDS

circRNA 5':CCACGUCUUCCAGCAUCUCUGUGUCUUCCAGCAU---CUUCAUGUCUUC 3'


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target  3':UGUGACU--GUUCGUUAUGUAAACCA---UCGUGACCGAAGUAAAGAAU 5'

 -17.00 1 RIC-seq