Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865680:139865694:[+] chr2:33752453:33752468:[+] nonBSJ supported CDS

circRNA 5':AGAA-AAAUCUGUGUC 3'


            || |||||::|||


target  3':ACUAGUUUAGGUACAA 5'

 -10.20 4 RIC-seq
chrX:139865874:139865891:[+] chr2:33752347:33752362:[+] nonBSJ supported CDS

circRNA 5':AUCCAGGUCU-UCCAGUCA 3'


            ||| ||| |||||||


target  3':GAGG---AGACAGGUCAGA 5'

 -15.80 68 RIC-seq
chrX:139865875:139865891:[+] chr2:33752347:33752362:[+] nonBSJ supported CDS

circRNA 5': UCCAGGUCU-UCCAGUCA 3'


            ||| ||| |||||||


target  3':GAGG---AGACAGGUCAGA 5'

 -15.80 1 RIC-seq