Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865995:139866031:[+] chr4:88420686:88420740:[-] nonBSJ supported 5UTR

circRNA 5':CCAGUAACCU-------------------CCCAGUCUUCCAGAAAAUCCACGUCUU 3'


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target  3':CGUCAAGGGUUCUCUGUAUCCUUUUUUUCGGGUCAGAAGUACGAA-AGGUCUAGAC 5'

 -28.70 1 RIC-seq
chrX:139866135:139866143:[+] chr4:88415243:88415251:[-] nonBSJ supported CDS

circRNA 5':GGUCUUCCA 3'


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target  3':ACAGAAGGA 5'

 -12.10 2 RIC-seq