Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866552:139866573:[+] chr12:119631996:119632018:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCAGA-AAAUAUAUGUCUUC 3'


            |:||||| ||| || :|||


target  3':AGGGGUCUCUUUUCAUUGGGAAC 5'

 -9.70 3 RIC-seq
chrX:139866552:139866575:[+] chr12:119631993:119632018:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCAGA-AAAUAUAUGUCUUCCA 3'


            |:||||| ||| || :||| ||


target  3':AGGGGUCUCUUUUCAUUGGGAACGUA 5'

 -10.30 8 RIC-seq