Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865596:139865641:[+] chr10:121335108:121335172:[-] nonBSJ supported 3UTR

circRNA 5':CCACGUCUUC---------CAGGAAAUCCAUGUCUUCCAAUAAUUUCAA-----------GGUCUU 3'


            || |||||| ||||||||| |:|| || |||| ||| :|||:


target  3':AGUACAGAAGUCUCACAGUGUCCUUUAGCUUCGGAUAGUACUUAAUGUUAAAAAAAAAUCUCAGG 5'

 -29.10 1 RIC-seq
chrX:139865596:139865644:[+] chr10:121335108:121335173:[-] nonBSJ supported 3UTR

circRNA 5':CCACGUCUUC---------CAGGAAAUCCAUGUCUUCCAAUAAUUUCAA---------GGUCUUCCA 3'


            || |||||| ||||||||| |:|| || |||| ||| :| |:||


target  3':AGUACAGAAGUCUCACAGUGUCCUUUAGCUUCGGAUAGUACUUAAUGUUAAAAAAAAAUCUCAGGG 5'

 -29.90 1 RIC-seq