Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866246:139866274:[+] chr10:121339487:121339512:[-] nonBSJ supported CDS

circRNA 5':CUUCCAACAAAGCCAUGUCUUCCAGACUA 3'


            ||||| |||||||||| :||||


target  3':AAAGGUCAA--CGGUACAGAAA--UUGAUG 5'

 -23.40 2 RIC-seq
chrX:139866246:139866276:[+] chr10:121339487:121339512:[-] nonBSJ supported CDS

circRNA 5':CUUCCAACAAAGCCAUGUCUUCCAGACUAUC 3'


            ||||| |||||||||| :||||:


target  3':AAAGGUCAA--CGGUACAGAAA--UUGAUG 5'

 -24.70 16 RIC-seq