Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866044:139866088:[+] chr6:56644472:56644515:[-] nonBSJ supported Intron

circRNA 5':AGUCUUCCGGAUAAUUUGGGUCUUCCUGAAAAUCUAC-GUCUUCCA 3'


            ||| :||| ||| | |||||||


target  3':ACAGUU--UCUAGUCUACCAACAUCUAUACACCGUAAUCAGAAGGA 5'

 -17.50 2 RIC-seq
chrX:139866414:139866444:[+] chr6:56410094:56410145:[-] nonBSJ supported Intron

circRNA 5':GCCUACUUGUGUCUUC-CA-------------------ACA----AAGGUACGUC 3'


           |||:| |: :|:|| || ||| |||||||||


target  3':CGGGU---CGGGGGAGUGUAAAAGUGUUACUCUCUUUAUGUAUUAUUCCAUGCAU 5'

 -23.10 2 RIC-seq
chrX:139866488:139866498:[+] chr6:56410135:56410145:[-] nonBSJ supported Intron

circRNA 5':AAAGGUACGUC 3'


            |||||||||


target  3':AUUCCAUGCAU 5'

 -13.00 2 RIC-seq