Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866404:139866416:[+] chr3:21552358:21552368:[-] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGCC 3'


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target  3':AACAGUC--UCGA 5'

 -6.10 24 RIC-seq
chrX:139866472:139866477:[+] chr3:21552368:21552374:[-] nonBSJ supported CDS

circRNA 5':AGGUAU 3'


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target  3':ACCAUAA 5'

 -5.10 1 RIC-seq
chrX:139866472:139866478:[+] chr3:21552368:21552374:[-] nonBSJ supported CDS

circRNA 5':AGGUAUG 3'


            |||||


target  3':ACCAUAA 5'

 -5.90 1 RIC-seq