Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866126:139866143:[+] chr13:44971543:44971561:[+] nonBSJ supported 3UTR

circRNA 5':UGGCCUCCAGGUCU--UCCA 3'


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target  3': UCGCAAAAAAAGAUAAGGC 5'

 -6.20 2 RIC-seq
chrX:139866126:139866143:[+] chr13:44971543:44971562:[+] nonBSJ supported 3UTR

circRNA 5':UGGCCUCCAGGUCU--UCCA 3'


            ||| ||| |||


target  3':CUCGCAAAAAAAGAUAAGGC 5'

 -6.50 19 RIC-seq