Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866076:139866089:[+] chr12:32530591:32530606:[+] nonBSJ supported 3UTR

circRNA 5':UCUACGU--CUUCCAA 3'


            ||||: ||||||


target  3':CGAUGUUUUGAAGGUG 5'

 -11.50 2 RIC-seq
chrX:139866328:139866359:[+] chr12:32446991:32447029:[+] nonBSJ supported CDS

circRNA 5':AUCCA---------GGUCUUCCAGGAAAUCCGUGUCUUCCA 3'


            |||| :|||:| |||| |||||:||:||


target  3':AAGGUUAAGUCAUAUCAGGACUUCCUC--GGCACGGAGGGC 5'

 -33.30 2 RIC-seq