Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865760:139865778:[+] chr10:134019086:134019103:[+] nonBSJ supported 3UTR

circRNA 5':UCAGUGUCUUCCAGAAAGA 3'


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target  3':UGUCACAGAAGGA-UUUCC 5'

 -21.90 12 RIC-seq
chrX:139865799:139865817:[+] chr10:134019086:134019103:[+] nonBSJ supported 3UTR

circRNA 5':UCAGUGUCUUCCAGAAAGA 3'


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target  3':UGUCACAGAAGGA-UUUCC 5'

 -21.90 8 RIC-seq
chrX:139865830:139865850:[+] chr10:134019091:134019121:[+] nonBSJ supported 3UTR

circRNA 5':CCAGUCAGU----------CAGUGUCUUCCA 3'


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target  3':UGUUAGACAUUAUUCUCCUGUCACAGAAGGA 5'

 -22.60 18 RIC-seq
chrX:139865836:139865850:[+] chr10:134019091:134019105:[+] nonBSJ supported 3UTR

circRNA 5':AGUCAGUGUCUUCCA 3'


            | |||||||||||


target  3':CCUGUCACAGAAGGA 5'

 -20.80 1 RIC-seq