Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866048:139866064:[+] chr3:65422856:65422871:[-] nonBSJ supported CDS

circRNA 5':UUCCGGAUAAUUUGGGU 3'


            || |||| :||||:


target  3': AGACCUAACGAACCUC 5'

 -9.90 69 RIC-seq
chrX:139866051:139866074:[+] chr3:65422867:65422883:[-] nonBSJ supported CDS

circRNA 5':CGGAUAAUUUGGGUCUUCCUGAAA 3'


            ||| |||| |||


target  3':ACCU------CCCACCAAACCUU 5'

 -7.20 1 RIC-seq