Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866364:139866399:[+] chr10:79613241:79613275:[-] nonBSJ supported CDS

circRNA 5':AUCCACGUCUUCCAACAAAGCCAUGUCU--UCCAUCAA 3'


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target  3':CAGGUGCAGUAGGAAG--UCGGCUCAGACCAGUGAGU 5'

 -31.40 1 RIC-seq
chrX:139866419:139866460:[+] chr10:79581826:79581860:[-] nonBSJ supported CDS

circRNA 5':CUUGUGUC-UUCCAACAAAGGUACGUCUUCCAACAAAGGUACG 3'


            ||| |:| :|||| ||| ||| ::|||


target  3':AGAC-CGGUGAGGUGC--UCCUCG-AGACUCCC----UUAUGG 5'

 -13.90 4 RIC-seq